Hierarchical Clustering
I realized I didn't do this before but do tend to do this to see the tree. So here is the simple workflow. So Simple and GUI by KNIME.
and the result
Yes, too many data points. But wanted to see how much time it takes to calculate this.
6000 datapoints and 1024 ECFP. I waited for 2 hours, and didn't finish. Went to sleep and it was done. haha, nice experiment.
slept funny and my neck to shoulder hurts... couldn't go to golf practice... damn...